acml

AMD Core Math Library (ACML) for x86 and amd64 CPUs

amd

Library to order a sparse matrix prior to Cholesky factorization

arpack

Arnoldi package library to solve large scale eigenvalue problems.

arprec

Arbitrary precision float arithmetics and functions

balbes-db

The database for the BALBES automated crystallographic molecular replacement pipeline

beagle

Open BEAGLE, a versatile EC/GA/GP framework

blas-atlas

Automatically Tuned Linear Algebra Software BLAS implementation

blas-goto

Fast implementations of the Basic Linear Algebra Subroutines

blas-reference

Basic Linear Algebra Subprograms F77 reference implementations

btf

Algorithm for matrix permutation into block triangular form

buddy

BuDDY - A Binary Decision Diagram Package

camd

Library to order a sparse matrix prior to Cholesky factorization

cbflib

Library providing a simple mechanism for accessing CBF files and imgCIF files.

cblas-reference

C wrapper interface to the F77 reference BLAS implementation

ccfits

C++ interface for cfitsio

ccolamd

Constrained column approximate minimum degree ordering algorithm

ccp4-libs

Protein X-ray crystallography toolkit

cctbx

Computational Crystallography Toolbox

cdf

Common Data Format I/O library for multi-dimensional data sets

cfitsio

C and Fortran library for manipulating FITS files

cholmod

Sparse Cholesky factorization and update/downdate library

cifparse-obj

Provides an object-oriented application interface to information in mmCIF format

clipper

Object-oriented libraries for the organisation of crystallographic data and the performance of crystallographic computation

cln

Class library (C++) for numbers

colamd

Column approximate minimum degree ordering algorithm

coot-data

Data for the Crystallographic Object-Oriented Toolkit

cqrlib

An ANSI C implementation of a utility library for quaternion arithmetic and quaternion rotation math

csparse

Concise sparse matrix package.

cxsparse

Extended sparse matrix package.

djbfft

Extremely fast library for floating-point convolution

fftw

Fast C library for the Discrete Fourier Transform

galib

library for using genetic algorithms in C++ programs

gaul-devel

Genetic Algorithm Utility Library

gdal

GDAL is a translator library for raster geospatial data formats (includes OGR support)

geos

Geometry engine library for Geographic Information Systems

gerris

The Gerris Flow Solver

gsl

The GNU Scientific Library

gts

GNU Triangulated Surface Library

hdf

General purpose library and format for storing scientific data

hdf5

General purpose library and file format for storing scientific data

indilib

INDI Astronomical Control Protocol library

io_lib

A general purpose trace and experiment file reading/writing interface

ipp

Intel(R) Integrated Performance Primitive library for multimedia and data processing

itpp

C++ library of mathematical, signal processing and communication classes and functions

jmol-acme

Portions of the Acme collection required for jMol. Courtesy of ACME - Purveyors of fine freeware since 1972.

klu

Sparse LU factorization for circuit simulation

lapack-atlas

F77 and C LAPACK implementations using available ATLAS routines

lapack-reference

FORTRAN reference implementation of LAPACK Linear Algebra PACKage

ldl

Simple but educational LDL^T matrix factorization algorithm

libbufr

ECMWF BUFR library - includes both C and Fortran example utilities.

libcore

Robust numerical and geometric computation library

libctl

Guile-based library implementing flexible control files for scientific simulations

libdap

A C++ SDK which contains an implementation of DAP 2.0 and 3.2, both Client- and Server-side support.

libecwj2

Library for both the ECW and the ISO JPEG 2000 image file formats

libgeda

libgeda - this library provides functions needed for the gEDA core suite

libgenome

Library for sci-biology/mauve

libgeotiff

Library for reading TIFF files with embedded tags for geographic (cartographic) information

libghemical

Chemical quantum mechanics and molecular mechanics

libint

Used to evaluate traditional and novel two-body matrix elements (integrals) over Cartesian Gaussian functions

libmems

Library for sci-biology/mauve

libmuscle

Library for sci-biology/mauve

libnc-dap

An OPeNDAP-enabled version of the NetCDF 3.6 API that replaces the standard NetCDF library.

libnova

Celestial Mechanics and Astronomical Calculation Library

liborigin

Library for reading OriginLab OPJ project files

libqalculate

A modern multi-purpose calculator library

libsvm

Library for Support Vector Machines

libticables2

Library to handle different link cables for TI calculators

libticalcs2

Library for communication with TI calculators

libticonv

Charset conversion library for TI calculators

libtifiles2

Library for TI calculator files

mathgl

Math Graphics Library

mccp4

Mini-CCP4 library including mtz and map I/O

metis

A package for unstructured serial graph partitioning

minuit

A C++ physics analysis tool for function minimization

mkl

Intel(R) Math Kernel Library: linear algebra, fft, math functions

mmdb

The Coordinate Library is designed to assist CCP4 developers in working with coordinate files

mmtk

Molecular Modeling ToolKit for Python

monomer-db

Monomer library used for macromolecular structure building and refinement

neartree

Function library efficiently solving the Nearest Neighbor Problem(known as the post office problem)

netcdf

Scientific library and interface for array oriented data access

nlopt

Non-linear optimization library

oc

Network Data Access Protocol client C library

ogdi

OGDI - Open Geographical Datastore Interface, a GIS support library

openfoam

Open Field Operation and Manipulation - CFD Simulation Toolbox

openfoam-bin

Open Field Operation and Manipulation - CFD Simulation Toolbox

openfoam-kernel

OpenFOAM - kernel

openfoam-meta

Open Field Operation and Manipulation - CFD Simulation Toolbox

openfoam-solvers

OpenFOAM - solvers

openfoam-src

OpenFOAM - sources

openfoam-utilities

OpenFOAM - utilities

openfoam-wmake

OpenFOAM - wmake

parmetis

Parallel graph partitioner

parmgridgen

Software for parallel (mpi) generating coarse grids

pgplot

FORTRAN/C device-independent scientific graphic library

plotmm

Plot widget for GTKmm

plplot

Multi-language scientific plotting library

primegen

A small, fast library to generate primes in order

proj

Proj.4 cartographic projection software with updated NAD27 grids

pymmlib

Software toolkit and library of routines for the analysis and manipulation of macromolecular structural models

qd

Quad-double and double-double float arithmetics

qfits

ESO stand-alone C library offering easy access to FITS files.

qrupdate

A library for fast updating of QR and Cholesky decompositions

rcsb-data

Data required to run RCSB PDB applications

scipy

Scientific algorithms library for Python

scotch

Software package and libraries for graph partitioning, static mapping, and sparse matrix block ordering

shapelib

library for manipulating ESRI Shapefiles

spqr

Multithreaded multifrontal sparse QR factorization library

starparse

Library for parsing NMR star files (peak-list format) and CIF files

suitesparse

Meta package for a suite of sparse matrix tools

szip

Szip is an implementation of the extended-Rice lossless compression algorithm

ta-lib

Technical Analysis Library for analyzing financial markets trends

taucs

C library of sparse linear solvers

torch

machine-learning library, written in simple C++

udunits

The UCAR/Unidata Units library

ufconfig

Common configuration scripts for the SuiteSparse libraries

umfpack

Unsymmetric multifrontal sparse LU factorization library

vecmath-objectclub

Unofficial free implementation of Sun javax.vecmath by Kenji Hiranabe

vtk

The Visualization Toolkit

xgks-pmel

PMEL fork of XGKS, an X11-based version of the ANSI Graphical Kernel System.

xylib

Experimental x-y data reading library

acml

indilib

nlopt

amd

io_lib

oc

arpack

ipp

ogdi

arprec

itpp

openfoam

balbes-db

jmol-acme

openfoam-bin

beagle

klu

openfoam-kernel

blas-atlas

lapack-atlas

openfoam-meta

blas-goto

lapack-reference

openfoam-solvers

blas-reference

ldl

openfoam-src

btf

libbufr

openfoam-utilities

buddy

libcore

openfoam-wmake

camd

libctl

parmetis

cbflib

libdap

parmgridgen

cblas-reference

libecwj2

pgplot

ccfits

libgeda

plotmm

ccolamd

libgenome

plplot

ccp4-libs

libgeotiff

primegen

cctbx

libghemical

proj

cdf

libint

pymmlib

cfitsio

libmems

qd

cholmod

libmuscle

qfits

cifparse-obj

libnc-dap

qrupdate

clipper

libnova

rcsb-data

cln

liborigin

scipy

colamd

libqalculate

scotch

coot-data

libsvm

shapelib

cqrlib

libticables2

spqr

csparse

libticalcs2

starparse

cxsparse

libticonv

suitesparse

djbfft

libtifiles2

szip

fftw

mathgl

ta-lib

galib

mccp4

taucs

gaul-devel

metis

torch

gdal

minuit

udunits

geos

mkl

ufconfig

gerris

mmdb

umfpack

gsl

mmtk

vecmath-objectclub

gts

monomer-db

vtk

hdf

neartree

xgks-pmel

hdf5

netcdf

xylib